Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs34099716 | chr5:79955360 | G/GT | 0.000112 | 211 | 18.65 | 14.97 | 9.77 | KM Plot |
KIRP | rs34105070 | chr6:27560805 | C/T | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
KIRP | rs34107459 | chr6:26328353 | T/C | 2.23E-7 | 212 | 15.33 | 15.02 | 9.77 | KM Plot |
KIRP | rs34138625 | chr10:70702012 | CTG/C | 8.57E-9 | 213 | 14.87 | 18.03 | 9.77 | KM Plot |
KIRP | rs34146994 | chr10:70698526 | T/C | 7.43E-9 | 214 | 14.87 | 18.77 | 9.77 | KM Plot |
KIRP | rs34150729 | chr6:27388754 | T/C | 1.71E-7 | 214 | 16.5 | 13.6 | 9.77 | KM Plot |
KIRP | rs34157767 | chr10:102031373 | C/CT | 3.76E-7 | 213 | 15.88 | 19.83 | 5.7 | KM Plot |
KIRP | rs34166054 | chr6:28065801 | T/C | 4.75E-7 | 213 | 15.88 | 16.68 | 9.77 | KM Plot |
KIRP | rs34194357 | chr6:27818535 | A/G | 1.98E-7 | 214 | 16.47 | 12.8 | 9.77 | KM Plot |
KIRP | rs34218844 | chr6:28290647 | T/C | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
KIRP | rs34223192 | chr10:63391219 | T/C | 0 | 214 | 18.03 | 8.07 | 1.17 | KM Plot |
KIRP | rs34243448 | chr6:28193102 | C/A | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
KIRP | rs34251886 | chr17:45320299 | G/T | 2.3E-11 | 209 | 14.83 | 28.03 | 0.43 | KM Plot |
KIRP | rs34268388 | chr5:79941419 | TA/T | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs34271382 | chr10:70647742 | AT/A | 1.31E-8 | 210 | 14.53 | 18.77 | 9.77 | KM Plot |